pub:start
Differences
This shows you the differences between two versions of the page.
Both sides previous revisionPrevious revisionNext revision | Previous revisionLast revisionBoth sides next revision | ||
pub:start [2019/01/29 14:07] – [ILDIS publications] admin@ildis.org | pub:start [2019/01/29 15:10] – admin@ildis.org | ||
---|---|---|---|
Line 1: | Line 1: | ||
====== ILDIS publications ====== | ====== ILDIS publications ====== | ||
+ | |||
+ | * [[bib:]] | ||
+ | * [[.notes:]] | ||
(under construction) | (under construction) | ||
Line 5: | Line 8: | ||
Adey, M.E., Allkin, R., Bisby, F.A., White, R.J. & Macfarlane, | Adey, M.E., Allkin, R., Bisby, F.A., White, R.J. & Macfarlane, | ||
The Vicieae Database: an experimental taxonomic monograph. | The Vicieae Database: an experimental taxonomic monograph. | ||
- | In: R. Allkin and F.A. Bisby, eds. | + | In: R. Allkin and F.A. Bisby, 1984, pp. 175-188 |
- | //Databases in Systematics//, | + | <wrap lo right>[book at 1CM]</ |
- | London, Academic Press, Systematics Association Special Volume **26**, 1984, 175-188 | + | |
- | [book at 1CM] | + | |
<WRAP lo rightalign> | <WRAP lo rightalign> | ||
- | //( | + | //(Describes the Vicieae Database Project and how its morphological data set |
- | )// | + | for the legume tribe Vicieae was assembled and managed |
+ | (using the Exir DBMS with several purpose-written import and export utilities) | ||
+ | in order to permit querying and the production of various printed reports. | ||
+ | Data encoding and conversion is discussed.)// | ||
</ | </ | ||
+ | |||
+ | R. Allkin and F.A. Bisby, eds. | ||
+ | //Databases in Systematics//, | ||
+ | London, Academic Press, Systematics Association Special Volume **26**, 1984. | ||
+ | <wrap lo right> | ||
Allkin, R. & White, R.J. | Allkin, R. & White, R.J. | ||
Line 20: | Line 29: | ||
// | // | ||
Elsevier (North-Holland), | Elsevier (North-Holland), | ||
- | [book at 8SG] | + | <wrap lo right>[book at 8SG]</ |
<WRAP lo rightalign> | <WRAP lo rightalign> | ||
- | :TODO: //(Notes to be completed)// | + | :!: //(Notes to be completed)// |
</ | </ | ||
Line 29: | Line 38: | ||
Handling the structure of biological data. | Handling the structure of biological data. | ||
// | // | ||
+ | |||
+ | Babac M.T. & Bisby, F.A. | ||
+ | A Chemotaxonomic Database. | ||
+ | In: R. Allkin and F.A. Bisby, 1984, pp. 209-218 | ||
+ | <wrap lo right> | ||
+ | |||
+ | <WRAP lo rightalign> | ||
+ | // | ||
+ | managed by the Exir DBMS, built as part of the Vicieae Database Project | ||
+ | and planned to be a "phase 2" project for ILDIS.)// | ||
+ | </ | ||
Bisby, F.A., White, R.J., Macfarlane, T.D. & Babac, M.T. | Bisby, F.A., White, R.J., Macfarlane, T.D. & Babac, M.T. | ||
Line 38: | Line 58: | ||
Oxford University Press, 1993 | Oxford University Press, 1993 | ||
[the title page quotes the Clarendon Press, Oxford, 1993, but the actual publication date was February 1994] | [the title page quotes the Clarendon Press, Oxford, 1993, but the actual publication date was February 1994] | ||
- | [book at 1CM] | + | <wrap lo right>[book at 1CM]</ |
Southon, I.W., Bisby, F.A., Buckingham, J., Harborne, J.B., Zarucchi, J.L., Polhill, R.M., Adams, B.R., Lock, J.M., White, R.J., Bowes, I., Hollis, S. & Heald, J. | Southon, I.W., Bisby, F.A., Buckingham, J., Harborne, J.B., Zarucchi, J.L., Polhill, R.M., Adams, B.R., Lock, J.M., White, R.J., Bowes, I., Hollis, S. & Heald, J. | ||
// | // | ||
Chapman & Hall, London, 1994, 1580pp | Chapman & Hall, London, 1994, 1580pp | ||
- | [book at 8SG] | + | <wrap lo right>[book at 8SG]</ |
<WRAP lo rightalign> | <WRAP lo rightalign> | ||
- | :TODO: //(Notes to be completed)// | + | :!: //(Notes to be completed)// |
</ | </ | ||
Line 55: | Line 75: | ||
Roskov, Y.R., Bisby, F.A., Zarucchi, J.L., Schrire, B.D. & White, R.J. | Roskov, Y.R., Bisby, F.A., Zarucchi, J.L., Schrire, B.D. & White, R.J. | ||
World database of Legumes - results from the first twenty years of the ILDIS project. | World database of Legumes - results from the first twenty years of the ILDIS project. | ||
- | In: // | + | In: // |
+ | Scientific Program & Abstracts//, | ||
Roskov Y.R., Bisby F.A., Zarucchi J.L., Schrire B.D. & White R.J. (eds.) | Roskov Y.R., Bisby F.A., Zarucchi J.L., Schrire B.D. & White R.J. (eds.) | ||
Line 67: | Line 88: | ||
Systematic databases: the Baobab design and the Alice system. | Systematic databases: the Baobab design and the Alice system. | ||
In: Fortuner, R., ed., | In: Fortuner, R., ed., | ||
- | //Advances in Computer Methods for Systematic Biology: Artificial Intelligence, | + | //Advances in Computer Methods for Systematic Biology: |
+ | Artificial Intelligence, | ||
Johns Hopkins University Press, Baltimore, 1993, 297-311 | Johns Hopkins University Press, Baltimore, 1993, 297-311 | ||
- | [book at 1CM] | + | <wrap lo right>[book at 1CM]</ |
<WRAP lo rightalign> | <WRAP lo rightalign> | ||
- | //( | + | //(Describes four aspects of taxonomic data |
- | )// | + | (the taxon hierarchy, character variability and dependence, and missing values) |
+ | and how these are addressed in the unimplemented " | ||
+ | and in the Alice software suite which was specifically implemented | ||
+ | to handle these issues and provide a complete DBMS | ||
+ | for taxonomists and other biologists working with taxonomically organised data sets.)// | ||
</ | </ | ||
Line 94: | Line 120: | ||
<WRAP lo rightalign> | <WRAP lo rightalign> | ||
- | :TODO: //(Notes to be completed)// | + | :!: //(Notes to be completed)// |
</ | </ | ||
Line 100: | Line 126: | ||
Linking biodiversity databases: | Linking biodiversity databases: | ||
In: Curry, G.B. & Humphries, C.J., eds., | In: Curry, G.B. & Humphries, C.J., eds., | ||
- | // | + | // |
- | [book at 1CM] | + | CRC Press, Systematics Association Special Volume **73**, 2007, 111-128, ISBN 0-415-33290-7 |
+ | <wrap lo right>[book at 1CM]</ | ||
<WRAP lo rightalign> | <WRAP lo rightalign> | ||
- | : | + | //(Explains how large collaborative biological databases |
+ | (such as the ERMS checklist and the ILDIS World Database of Legumes) | ||
+ | were assembled by // | ||
+ | and contrasts this with // | ||
+ | in initiatives such as the Species 2000 Dynamic Checklist | ||
+ | and its further development in the Spice project. | ||
+ | Databases such as ILDIS and the Species 2000 Catalogue of Life are seen as | ||
+ | taxonomic backbones | ||
+ | to expand the range of data available to the user. | ||
+ | The reliability of such " | ||
+ | such as differing taxonomic treatments in the various data sets is discussed, | ||
+ | with a proposed solution using " | ||
+ | which was developed further in the " | ||
</ | </ | ||
Line 110: | Line 149: | ||
The ILDIS project on the world' | The ILDIS project on the world' | ||
In: Bisby, F.A., Russell, G.F. & Pankhurst, R.J., 1993, pp. 131-144 | In: Bisby, F.A., Russell, G.F. & Pankhurst, R.J., 1993, pp. 131-144 | ||
- | [book at 1CM] | + | <wrap lo right>[book at 1CM]</ |
<WRAP lo rightalign> | <WRAP lo rightalign> | ||
Line 117: | Line 156: | ||
and a few morphological and plant-use fields, with full citation of references, | and a few morphological and plant-use fields, with full citation of references, | ||
and explains current and planned future activities aiming to use this as a " | and explains current and planned future activities aiming to use this as a " | ||
- | to link in "Phase 2" data sets, especially phytochemistry and nodulation data. | + | to link in "Phase 2" data sets, especially phytochemistry |
Emphasises the role of ILDIS in providing services to users, | Emphasises the role of ILDIS in providing services to users, | ||
and interestingly assumes that scientists will send their requests to " | and interestingly assumes that scientists will send their requests to " | ||
Line 124: | Line 163: | ||
</ | </ | ||
- | ===== Notes (primarily for the Anne Bruneau legume history MS) ===== | ||
- | |||
- | Google doc at https:// | ||
- | |||
- | |||
- | ==== History ==== | ||
- | |||
- | According to Peter Brewer' | ||
- | ILDIS (Bisby //et al//. 2000, 2001) | ||
- | began in 1985 (Zarucchi //et al//., 1993) | ||
- | and was (at version 5 in 2001) " | ||
- | |||
- | The 5th ILDIS Workshop was held at Reading (17-18 November 2005) | ||
- | immediately following | ||
- | the 7th UK Legume Workshop held at Kew (15 November 2005). | ||
- | |||
- | |||
- | ==== Descendants ==== | ||
- | |||
- | ILDIS was was of the first two or three(?) GSDs contributing to the Species 2000 Catalogue of Life. | ||
- | |||
- | Burnett J., IOPI: genesis of GPSIS? | ||
- | In: Bisby, F.A., Russell, G.F. & Pankhurst, R.J., eds., | ||
- | //Designs for a Global Plant Species Information System//, | ||
- | Oxford University Press, 1994, 334-342 | ||
- | (IOPI could be viewed as a step between ILDIS and CoL.) | ||
- | [book at 8SG] | ||
pub/start.txt · Last modified: 2019/01/29 15:11 by admin@ildis.org